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  "about": "One row per publication or thesis on the map. Authors include a person id when that person is in the database. Places are facilities already linked on the map. Funding lists funder ids named in text that was read, marked internal or external; it is not a join to a grant record. Methods are tool and practice tags from that same read, without quotations. A methods tag includes a resource URL only when the tag is itself a resource on the map. Unread works keep empty funding and methods.",
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          "name": "Pohang Light Source (PLS) — Pohang Accelerator Laboratory",
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      "title": "Harnessing Generative AI for Lung Nodule Spiculation Characterization",
      "year": 2025,
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      "abstract": "Variational-autoencoder framework for lung nodule spiculation characterization using LIDC CT data; improves spiculation detection while preserving non-spiculated classification performance.",
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      "doi": "10.1007/s10278-025-01573-9",
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          "name": "Daniela Raicu",
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      "id": "PUB-005",
      "title": "Demystifying the local: Considerations for higher education engagement with community food systems",
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      "abstract": "Commentary on how higher-education institutions should engage low-income communities on local food projects, drawing on Chicago community-garden research including crop-yield studies and the Chicago Urban Agriculture Mapping Project (CUAMP).",
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      "doi": "10.5304/jafscd.2012.024.005",
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          "name": "Bernhard Beck-Winchatz",
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      "title": "A portable, low-cost relaxed eddy accumulation (REA) system for quantifying ecosystem-level fluxes of volatile organics",
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      "doi": "10.1016/j.atmosenv.2020.117764",
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      "title": "Microglial responses to inflammatory challenge in adult rats altered by developmental exposure to polychlorinated biphenyls in a sex-specific manner",
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      "abstract": "Perinatal PCB exposure alters adult microglial gene expression and morphology responses to LPS challenge in a sex- and brain-region-specific manner; Experiment 2 immunohistochemistry conducted at DePaul University.",
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      "doi": "10.1016/j.neuro.2024.07.009",
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          "name": "Margaret Bell",
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      "title": "Methane Generation from CO2 with a Molecular Rhenium Catalyst",
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      "abstract": "Reports isomeric rhenium(I) tricarbonyl complexes that electrochemically reduce carbon dioxide to methane and carbon monoxide, characterized by electrochemical and spectroscopic methods including bulk electrolysis and isotope labeling.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-009/",
      "doi": "10.1021/acs.inorgchem.0c02579",
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          "name": "Kyle A. Grice",
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      "title": "Local structure of zinc–indium–tin oxide films via grazing-incidence x-ray pair-distribution functions and theoretical methods",
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          "name": "Gabriela Gonzalez Aviles",
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      "id": "PUB-011",
      "title": "RRT*-based Path Planning for Continuum Arms",
      "year": 2022,
      "type": "journal_article",
      "abstract": "Workspace-based RRT* path planning for pneumatically actuated continuum arms, demonstrating obstacle avoidance and trajectory tracking with improved path quality versus configuration-space planners.",
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      "doi": "10.1109/lra.2022.3174257",
      "url": "https://doi.org/10.1109/lra.2022.3174257",
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          "name": "Iyad Kanj",
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      "title": "Chemoselective Zinc/HCl Reduction of Halogenated β-Nitrostyrenes: Synthesis of Halogenated Dopamine Analogs",
      "year": 2014,
      "type": "journal_article",
      "abstract": "Chemoselective reduction method for halogenated β-nitrostyrenes to halogenated dopamine analogues using zinc and HCl, developed with DePaul undergraduate and graduate chemistry collaborators.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-012/",
      "doi": "10.1055/s-0034-1379481",
      "url": "https://doi.org/10.1055/s-0034-1379481",
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      "id": "PUB-013",
      "title": "Design and Application of a Fluorogenic Assay for Monitoring Inflammatory Caspase Activity",
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      "abstract": "Describes design and application of a fluorogenic assay for monitoring inflammatory caspase activity using fluorescence-based methods developed for biochemical kinetics and substrate specificity studies.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-013/",
      "doi": "10.1016/j.ab.2017.11.035",
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          "name": "Caitlin E. Karver",
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      "title": "Structural, computational, docking and biological studies of a triaminopyrimidine caspase-1 inhibitor",
      "year": 2024,
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      "abstract": "Combined structural, computational docking, and biological studies of a triaminopyrimidine caspase-1 inhibitor scaffold relevant to inflammatory caspase medicinal chemistry.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-014/",
      "doi": "10.1016/j.molstruc.2024.139297",
      "url": "https://doi.org/10.1016/j.molstruc.2024.139297",
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          "name": "Caitlin E. Karver",
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          "name": "Grice Laboratory",
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      "title": "Freshwater colonization, adaptation, and genomic divergence in three spine stickleback fish: ancient and current events",
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      "doi": "10.1093/icb/icac071",
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          "name": "Windsor Aguirre",
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      "title": "Mid-infrared complex refractive indices for oleic acid and optical properties of model oleic acid/water aerosols",
      "year": 2009,
      "type": "journal_article",
      "abstract": "Reports mid-infrared complex refractive indices for oleic acid and optical properties of model oleic acid/water aerosols using spectroscopic methods relevant to tropospheric organic aerosol characterization.",
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      "doi": "10.1039/b905371a",
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      "title": "Controlling Popularity Bias in Learning-to-Rank Recommendation",
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      "type": "proceedings",
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      "doi": "10.1145/3109859.3109912",
      "url": "https://doi.org/10.1145/3109859.3109912",
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          "name": "Bamshad Mobasher",
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      "title": "Detection of protein Secondary Structures via the Discrete Wavelet Transform",
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      "doi": "10.1103/physreve.80.051909",
      "url": "https://doi.org/10.1103/physreve.80.051909",
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          "name": "Jesús Pando",
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    {
      "id": "PUB-019",
      "title": "Optimizing Computer-Aided Diagnosis with Cost-Aware Deep Learning Models",
      "year": 2024,
      "type": "proceedings",
      "abstract": "Develops cost-aware deep learning models for pulmonary nodule computer-aided diagnosis, optimizing sensitivity with explicit misclassification cost values.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-019/",
      "doi": "10.1142/9789811286421_0009",
      "url": "https://doi.org/10.1142/9789811286421_0009",
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          "name": "Thiru Ramaraj",
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      "id": "PUB-020",
      "title": "COVID-19 vs. Influenza: A Chest X-ray Comparison",
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      "type": "journal_article",
      "abstract": "Compares chest X-ray findings between COVID-19 and influenza cases using clinical imaging analysis methods.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-020/",
      "doi": "10.7759/cureus.31794",
      "url": "https://doi.org/10.7759/cureus.31794",
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          "name": "Jingjing Kipp",
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      "title": "Inclusive Involvement of At-Risk Users in Cybersecurity Research",
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      "doi": "10.1109/msec.2024.3416878",
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          "name": "Filipo Sharevski",
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      "id": "PUB-022",
      "title": "Provably Safe Neural Network Controllers via Differential Dynamic Logic",
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      "type": "proceedings",
      "abstract": "Presents provably safe neural network controllers verified using differential dynamic logic for cyber-physical systems safety guarantees.",
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      "doi": "10.52202/079017-0051",
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          "name": "Stefan Mitsch",
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      "title": "On the Grounds of Solutionism: Ontologies of Blackness and HCI",
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      "title": "Advances in the Microbiology of Stenotrophomonas maltophilia",
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      "doi": "10.1128/cmr.00030-19",
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      "title": "Automated Classification of Non-Functional Requirements",
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      "title": "DiiS: A Biomedical Data Access Framework for Aiding Data Driven Research Supporting FAIR Principles",
      "year": 2019,
      "type": "journal_article",
      "abstract": "Proposes the Data integration and indexing System (DiiS) framework for distributed biomedical data access with authentication, fine-grained controls, and support for geographically distributed datasets aligned with FAIR principles.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-026/",
      "doi": "10.3390/data4020054",
      "url": "https://doi.org/10.3390/data4020054",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-052",
          "name": "Jacob Furst",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-027",
      "title": "\"It could be better. It could be much worse\": Understanding Accessibility in User Experience Practice with Implications for Industry and Education",
      "year": 2023,
      "type": "journal_article",
      "abstract": "Qualitative study of accessibility practices among UX professionals, analyzing how industry work informs HCI pedagogy and program design.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-027/",
      "doi": "10.1145/3575662",
      "url": "https://doi.org/10.1145/3575662",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-048",
          "name": "Cynthia Putnam",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-028",
      "title": "Motivators and Barriers to COVID-19 Vaccination in Young Adults Living in the USA",
      "year": 2023,
      "type": "journal_article",
      "abstract": "Exploratory qualitative focus-group study identifying motivators and barriers to COVID-19 vaccination among young adults to inform educational program design.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-028/",
      "doi": "10.1177/10547738231177331",
      "url": "https://doi.org/10.1177/10547738231177331",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-023",
          "name": "LeAnne Wagner",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "julian_grace",
          "label": "Julian Grace Foundation",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "excel",
          "kind": "software"
        },
        {
          "name": "spreadsheet_or_office",
          "kind": "practice"
        },
        {
          "name": "stats_gui",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-029",
      "title": "A Conceptual Framework and Pilot Study for Examining Telemedicine Satisfaction Research",
      "year": 2019,
      "type": "journal_article",
      "abstract": "Develops a conceptual framework for telemedicine satisfaction research from a developmental literature review and pilot mapping of primary study sources.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-029/",
      "doi": "10.1007/s10916-019-1161-4",
      "url": "https://doi.org/10.1007/s10916-019-1161-4",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-017",
          "name": "Olayele Adelakun",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-030",
      "title": "A Remote Surgery Use Case for the IEEE P1918.1 Tactile Internet Standard",
      "year": 2021,
      "type": "proceedings",
      "abstract": "Maps a remote-surgery (cholecystectomy) use case to the IEEE P1918.1 Tactile Internet standard architecture for ultra-reliable low-latency haptic control.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-030/",
      "doi": "10.1109/icc42927.2021.9500645",
      "url": "https://doi.org/10.1109/icc42927.2021.9500645",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-004",
          "name": "Sharief Oteafy",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-031",
      "title": "Digital Health Meets APIE: Advancing Recreational Therapy through Ecological Momentary Assessment and Real-Time Predictive Modeling",
      "year": 2026,
      "type": "journal_article",
      "abstract": "Describes ecological momentary assessment and real-time predictive modeling methods for advancing recreational therapy practice in digital health settings.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-031/",
      "doi": "10.18666/trj-2025-v60-i1-13091",
      "url": "https://doi.org/10.18666/trj-2025-v60-i1-13091",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-011",
          "name": "Casey Bennett",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-032",
      "title": "Avant-garde Videogames: Playing with Technoculture",
      "year": 2014,
      "type": "book",
      "abstract": "Theoretical framework for avant-garde videogames as formal and political art practice, examining radical formal, political, and complicit game design strategies.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-032/",
      "doi": "10.7551/mitpress/9780262027144.001.0001",
      "url": "https://doi.org/10.7551/mitpress/9780262027144.001.0001",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-064",
          "name": "Brian Schrank",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-033",
      "title": "The isosmotic point as critical salinity limit for growth and osmoregulation, but not survival, in the wolf eel Anarrhichthys ocellatus",
      "year": 2022,
      "type": "journal_article",
      "abstract": "Examines growth performance and osmoregulation in juvenile wolf eel across dilute salinities, identifying an isosmotic point near 10.6 ppt using gill enzyme and plasma ion analyses.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-033/",
      "doi": "10.1007/s10695-022-01064-6",
      "url": "https://doi.org/10.1007/s10695-022-01064-6",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-053",
          "name": "Jason Bystriansky",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "depaul_urc",
          "label": "DePaul University Research Council",
          "scope": "internal"
        },
        {
          "funder_id": "depaul_fsrg",
          "label": "DePaul Faculty Summer Research Grant (FSRG)",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "graphpad-prism",
          "kind": "software"
        },
        {
          "name": "stats_gui",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-034",
      "title": "Repeat subconcussion in the adult rat gives rise to behavioral deficits similar to a single concussion but different depending upon sex",
      "year": 2023,
      "type": "journal_article",
      "abstract": "Models repeat subconcussive closed-head injury in adult rats and reports sex-dependent behavioral deficits in locomotion, righting reflex, and recognition memory.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-034/",
      "doi": "10.1016/j.bbr.2023.114206",
      "url": "https://doi.org/10.1016/j.bbr.2023.114206",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-045",
          "name": "Dorothy Kozlowski",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-035",
      "title": "Experimental and Theoretical Investigation of the Coordination of 8-Hydroxquinoline Inhibitors to Biomimetic Zinc Complexes and Histone Deacetylase 8 (HDAC8)",
      "year": 2024,
      "type": "journal_article",
      "abstract": "Merges experimental and theoretical approaches to analyze coordination of 8-hydroxylquinoline inhibitors with biomimetic zinc complexes and human HDAC8; assesses derivatives with protein–ligand docking and model zinc hydrolase mimics.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-035/",
      "doi": "10.3390/foundations4030024",
      "url": "https://doi.org/10.3390/foundations4030024",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-100",
          "name": "Kyle A. Grice",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-036",
      "title": "Synthesis, characterization, computational studies, and reactivity of platinum(II) complexes of alkyl phosphite ligands",
      "year": 2023,
      "type": "journal_article",
      "abstract": "Reports synthesis and characterization of platinum(II) complexes bearing alkyl phosphite ligands, with computational and reactivity studies (Crossref authorship verified; abstract not returned by Crossref/OpenAlex).",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-036/",
      "doi": "10.1016/j.jorganchem.2023.122817",
      "url": "https://doi.org/10.1016/j.jorganchem.2023.122817",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-100",
          "name": "Kyle A. Grice",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-037",
      "title": "Evaluating Low Cost Sensor Performance for Use in Industrial Internet-of-Things Platforms: Distributed Sensing Solutions for Urban Area Air Quality Health Monitors",
      "year": 2020,
      "type": "proceedings",
      "abstract": "Array of Things smart-cities initiative (NSF-funded) partnership between Argonne National Laboratory, University of Chicago, and City of Chicago. Hundreds of distributed nodes incorporate seven low-power electrochemical gas sensors (O3, NO2, CO, etc.) for urban air-quality monitoring; calibration methods developed comparing sensors to reference-grade monitors (March 2018–June 2019) with sensor sub-assemblies calibrated at KWJ Engineering (Newark, CA).",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-037/",
      "doi": "10.1149/ma2020-013022266mtgabs",
      "url": "https://doi.org/10.1149/ma2020-013022266mtgabs",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-097",
          "name": "Mark J. Potosnak",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-015",
          "name": "Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-015/"
        }
      ],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-038",
      "title": "Satellite-derived constraints on the effect of drought stress on biogenic isoprene emissions in the southeastern US",
      "year": 2022,
      "type": "journal_article",
      "abstract": "Abstract. While substantial progress has been made to improve our\nunderstanding of biogenic isoprene emissions under unstressed conditions,\nlarge uncertainties remain with respect to isoprene emissions under stressed\nconditions. Here, we use the US Drought Monitor (USDM) as a weekly drought\nseverity index and tropospheric columns of formaldehyde (HCHO), the key\nproduct of isoprene oxidation, retrieved from the Ozone Monitoring\nInstrument (OMI) to derive top-down constraints on the response of\nsummertime isoprene emissions to drought stress in the southeastern United States (SE\nUS), a region of high isoprene emissions that is also prone to drought. OMI HCHO\ncolumn density is found to be 6.7 % (mild drought) to 23.3 % (severe\ndrought) higher than that under non-drought conditions. A global chemical\ntransport model, GEOS-Chem, with version 2.1 of the Model of\nEmissions of Gases and Aerosols from Nature (MEGAN2.1) emission algorithm can\nsimulate this direction of change, but the simulated increases at the\ncorresponding drought levels are 1.1–1.5 times that of OMI HCHO, suggesting the\nneed for a drought-stress algorithm in the model. By minimizing the\nmodel–OMI differences in HCHO to temperature sensitivity under different\ndrought levels, we derived a top-down drought stress factor (γd_OMI) in GEOS-Chem that parameterizes using water\nstress and temperature. The algorithm led to an 8.6 % (mild drought) to 20.7 % (severe drought) reduction in isoprene emissions in the SE US\nrelative to the simulation without it. With γd_OMI the model predicts a nonlinear increasing trend in isoprene emissions\nwith drought severity that is consistent with OMI HCHO and a single site's\nisoprene flux measurements. Compared with a previous drought stress\nalgorithm derived from the latter, the satellite-based drought stress factor\nperforms better with respect to capturing the regional-scale drought–isoprene responses,\nas indicated by the near-zero mean bias between OMI and simulated HCHO\ncolumns",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-038/",
      "doi": "10.5194/acp-22-14189-2022",
      "url": "https://doi.org/10.5194/acp-22-14189-2022",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-097",
          "name": "Mark J. Potosnak",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nasa",
          "label": "NASA",
          "scope": "external"
        }
      ],
      "methods": []
    },
    {
      "id": "PUB-039",
      "title": "Mechanistic Distinction Between Oxidative and Chlorination Transformations of Chloroperoxidase from Caldariomyces fumago Demonstrated by Dye Decolorization",
      "year": 2025,
      "type": "journal_article",
      "abstract": "Effluents from the textile industry, particularly those containing synthetic azo dyes, poses a significant environmental threat, necessitating the development of more effective and sustainable pollutant removal methods. Traditional dye removal techniques often fall short in efficiency and environmental impact, prompting the exploration of enzymatic degradation as a promising alternative. This study focuses on chloroperoxidase, a natural biocatalyst recognized for its ability to oxidize synthetic dyes into less harmful products. By exploring the mechanistic distinction between chlorination and oxidative processes, we investigate the enzyme’s specific degradation pathways for azo dyes and the resulting by-products. Utilizing analytical techniques, including liquid chromatography/mass spectrometry (LC/MS), and density functional theory (DFT), we gain insights into the decolorization mechanism, revealing that the enzyme preferentially generates oxidative products through C–N bond cleavage as its initial degradation step. These findings underscore not only the unique mechanistic properties of chloroperoxidase but also its potential as a biocatalyst for industrial applications. This study advocates further research into the optimization of enzyme-based systems, highlighting their relevance in advancing greener chemical practices in the textile industry, thus contributing to more sustainable manufacturing processes.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-039/",
      "doi": "10.3390/catal15100965",
      "url": "https://doi.org/10.3390/catal15100965",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-100",
          "name": "Kyle A. Grice",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-040",
      "title": "More than just friends: in-home use and design recommendations for sensing socially assistive robots (SARs) by older adults with depression",
      "year": 2019,
      "type": "journal_article",
      "abstract": "Abstract \n As healthcare turns its focus to preventative community-based interventions, there is increasing interest in using in-home technology to support this goal. This study evaluates the design and use of socially assistive robots (SARs) and sensors as in-home therapeutic support for older adults with depression. The seal-like SAR Paro, along with onboard and wearable sensors, was placed in the homes of 10 older adults diagnosed with clinical depression for one month. Design workshops were conducted before and after the in-home implementation with participating older adults and clinical care staff members. Workshops showed older adults and clinicians sawseveral potential uses for robots and sensors to support in-home depression care. Long-term in-home use of the robot allowed researchers and participants to situate desired robot features in specific practices and experiences of daily life, and some user requests for functionality changed due to extended use. Sensor data showed that participants’ attitudes toward and intention to use the robot were strongly correlated with particular Circadian patterns (afternoon and evening) of robot use. Sensor data also showed that those without pets interacted with Paro significantly more than those with pets, and survey data showed they had more positive attitudes toward the SAR. Companionship, while a desired capability, emerged as insufficient to engage many older adults in long-term use of SARs in their home.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-040/",
      "doi": "10.1515/pjbr-2019-0020",
      "url": "https://doi.org/10.1515/pjbr-2019-0020",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-011",
          "name": "Casey Bennett",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-041",
      "title": "Generative replay for multi-class modeling of human activities via sensor data from in-home robotic companion pets",
      "year": 2024,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-041/",
      "doi": "10.1007/s11370-023-00496-0",
      "url": "https://doi.org/10.1007/s11370-023-00496-0",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-011",
          "name": "Casey Bennett",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        }
      ],
      "methods": []
    },
    {
      "id": "PUB-042",
      "title": "Efficient Trotting of Soft Robotic Quadrupeds",
      "year": 2025,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-042/",
      "doi": "10.1109/tase.2025.3553082",
      "url": "https://doi.org/10.1109/tase.2025.3553082",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-014",
          "name": "Iyad Kanj",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "matlab",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-043",
      "title": "Leveraging Tactile Internet Cognizance and Operation via IoT and Edge Technologies",
      "year": 2019,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-043/",
      "doi": "10.1109/jproc.2018.2873577",
      "url": "https://doi.org/10.1109/jproc.2018.2873577",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-004",
          "name": "Sharief Oteafy",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-044",
      "title": "Automated Skill Evaluation of Bronchoscopy Operators Using Geometric Feature Analysis",
      "year": 2025,
      "type": "journal_article",
      "abstract": "Bronchoscopy is a critical procedure for diagnosing and treating lung conditions, but current training assessments are subjective and time-consuming. More objective skill assessment methods are needed to ensure clinician competence. We propose an automatic skill assessment method to classify bronchoscope operators as experts or novices. Pose data from an electromagnetic tracker was collected during bronchoscopy on a lung model. We define geometric features that capture key aspects of operator performance and used them to train a classifier distinguishing experts from novices. Our results show that expert operators adhere more closely to the geometric features, with smaller deviations and greater consistency, while novice operators exhibit higher variance. Statistical analysis confirmed significant differences between expert and novice performance. The classifier achieved high accuracy, with precision and recall ranging from 0.89 to 1.0 across tasks. This automated skill assessment method effectively classifies bronchoscopy operators and offers a potential tool for improving training and developing robotic bronchoscopy systems.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-044/",
      "doi": "10.1142/s2424905x25500072",
      "url": "https://doi.org/10.1142/s2424905x25500072",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-010",
          "name": "David Hanley",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-045",
      "title": "A Formal Safety Net for Waypoint-Following in Ground Robots",
      "year": 2019,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-045/",
      "doi": "10.1109/lra.2019.2923099",
      "url": "https://doi.org/10.1109/lra.2019.2923099",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-005",
          "name": "Stefan Mitsch",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-046",
      "title": "Captivates",
      "year": 2021,
      "type": "journal_article",
      "abstract": "We present Captivates, an open-source smartglasses system designed for long-term, in-the-wild psychophysiological monitoring at scale. Captivates integrate many underutilized physiological sensors in a streamlined package, including temple and nose temperature measurement, blink detection, head motion tracking, activity classification, 3D localization, and head pose estimation. Captivates were designed with an emphasis on: (1) manufacturing and scalability, so we can easily support large scale user studies for ourselves and offer the platform as a generalized tool for ambulatory psychophysiology research; (2) robustness and battery life, so long-term studies result in trustworthy data individual's entire day in natural environments without supervision or recharge; and (3) aesthetics and comfort, so people can wear them in their normal daily contexts without self-consciousness or changes in behavior. \n Captivates are intended to enable large scale data collection without altering user behavior. We validate that our sensors capture useful data robustly for a small set of beta testers. We also show that our additional effort on aesthetics was imperative to meet our goals; namely, earlier versions of our prototype make people uncomfortable to interact naturally in public, and our additional design and miniaturization effort has made a significant impact in preserving natural behavior. \n There is tremendous promise in translating psychophysiological laboratory techniques into real-world insight. Captivates serve as an open-source bridge to this end. Paired with an accurate underlying model, Captivates will be able to quantify the long-term psychological impact of our design decisions and provide real-time feedback for technologists interested in actuating a cognitively adaptive, user-aligned future.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-046/",
      "doi": "10.1145/3478079",
      "url": "https://doi.org/10.1145/3478079",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-001",
          "name": "David Ramsay",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-047",
      "title": "AR Circuit Constructor: Combining Electricity Building Blocks and Augmented Reality for Analogy-Driven Learning and Experimentation",
      "year": 2020,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-047/",
      "doi": "10.1109/ismar-adjunct51615.2020.00019",
      "url": "https://doi.org/10.1109/ismar-adjunct51615.2020.00019",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-065",
          "name": "Richard Wetzel",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-048",
      "title": "Experiential User-Centered Security in a Classroom: Secure Design for IoT",
      "year": 2019,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-048/",
      "doi": "10.1109/mcom.001.1900223",
      "url": "https://doi.org/10.1109/mcom.001.1900223",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-003",
          "name": "Filipo Sharevski",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-049",
      "title": "Structural measurement of electron-phonon coupling and electronic thermal transport across a metal-semiconductor interface",
      "year": 2022,
      "type": "journal_article",
      "abstract": "Abstract Scattering of energetic charge carriers and their coupling to lattice vibrations (phonons) in dielectric materials and semiconductors are crucial processes that determine the functional limits of optoelectronics, photovoltaics, and photocatalysts. The strength of these energy exchanges is often described by the electron-phonon coupling coefficient, which is difficult to measure due to the microscopic time- and length-scales involved. In the present study, we propose an alternate means to quantify the coupling parameter along with thermal boundary resistance and electron conductivity by performing a high angular-resolution time-resolved X-ray diffraction measurement of propagating lattice deformation following laser excitation of a nanoscale, polycrystalline metal film on a semiconductor substrate. Our data present direct experimental evidence for identifying the ballistic and diffusive transport components occurring at the interface, where only the latter participates in thermal diffusion. This approach provides a robust measurement that can be applied to investigate microscopic energy transport in various solid-state materials.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-049/",
      "doi": "10.1038/s41598-022-20715-5",
      "url": "https://doi.org/10.1038/s41598-022-20715-5",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        },
        {
          "resource_id": "EXT-018",
          "name": "Pohang Light Source (PLS) — Pohang Accelerator Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-018/"
        }
      ],
      "funding": [
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        },
        {
          "funder_id": "depaul_urc",
          "label": "DePaul University Research Council",
          "scope": "internal"
        },
        {
          "funder_id": "depaul_fsrg",
          "label": "DePaul Faculty Summer Research Grant (FSRG)",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-050",
      "title": "Pushing x-ray photon correlation spectroscopy beyond the continuous frame rate limit",
      "year": 2016,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-050/",
      "doi": "10.1364/oe.24.000355",
      "url": "https://doi.org/10.1364/oe.24.000355",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-051",
      "title": "Elucidating the Solution-Phase Structure and Behavior of 8-Hydroxyquinoline Zinc in DMSO",
      "year": 2018,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-051/",
      "doi": "10.1021/acs.jpca.7b12632",
      "url": "https://doi.org/10.1021/acs.jpca.7b12632",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-100",
          "name": "Kyle A. Grice",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        },
        {
          "resource_id": "EXT-041",
          "name": "Center for Nanoscale Materials (CNM) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-041/"
        }
      ],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        },
        {
          "funder_id": "depaul_fsrg",
          "label": "DePaul Faculty Summer Research Grant (FSRG)",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "gaussian",
          "kind": "software"
        },
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-052",
      "title": "Integration of Reproducible Methods into Community Cyberinfrastructure",
      "year": 2020,
      "type": "journal_article",
      "abstract": "For science to reliably support new discoveries, its results must be\nreproducible. This has proven to be a challenge in many fields including\nfields that rely on computational methods as a means for supporting new\ndiscoveries. Reproducibility in these studies is particularly difficult\nbecause they require open, documented sharing of data and models and\ncareful control of underlying hardware and software dependencies so that\ncomputational procedures executed by the original researcher are\nportable and can be run on different hardware or software and produce\nconsistent results. Despite recent advances in making scientific work\nmore findable, accessible, interoperable and reusable (FAIR),\nfundamental questions in the conduct of reproducible computational\nstudies remain: Can published results be repeated in different computing\nenvironments? If yes, how similar are they to previous results? Can we\nfurther verify and build on the results by using additional data or\nchanging computational methods? Can these changes be automatically and\nsystematically tracked? This presentation will describe our EarthCube\nproject to advance computational reproducibility and make it easier and\nmore efficient for geoscientists to preserve, share, repeat and\nreplicate scientific computations. Our approach is based on Sciunit\nsoftware developed by prior EarthCube projects which encapsulates\napplication dependencies composed of system binaries, code, data,\nenvironment and application provenance so that the resulting\ncomputational research object can be shared and re-executed on different\nplatforms. We have deployed Sciunit within the HydroShare JupyterHub\nplatform operated by the Consortium of Universities for the Advancement\nof Hydrologic Science Inc. (CUAHSI) for the hydrology research community\nand will present use cases that demonstrate how to preserve, share,\nrepeat and replicate scientific results from the field of hydrologic\nmodeling. While illustrated in the context of hydrology, the met",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-052/",
      "doi": "10.1002/essoar.10503642.1",
      "url": "https://doi.org/10.1002/essoar.10503642.1",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-124",
          "name": "Tanu Malik",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-053",
      "title": "Mid-Infrared Complex Refractive Indices for Motor Oils",
      "year": 2019,
      "type": "journal_article",
      "abstract": "The extent to which tropospheric aerosols impact the environment,\nparticularly with regard to climate and human health, remains quite\nuncertain. Given their proximity to Earth's surface, such particles are\nlikely to contain mixtures of organic and inorganic materials. In\naddition, they are likely to take on different shapes and have different\nphases. Reducing the uncertainties in the role these particles play\nrequires detailed knowledge of the chemical and physical properties of\nthe materials they are made from. This work focuses on the retrieval of\nmid-infrared complex refractive indices from the aerosol extinction\nspectra of commercially available motor oils. There is reason to believe\nthat motor oils could contribute organic material to tropospheric\nparticles, especially in urban areas with high concentrations of\ninternal combustion processes. Refractive index data for these systems\ncan be used in remote sensing applications to measure, amongst other\nthings, composition and particle size. The motor oil results will be\ncompared to refractive indices of long-chain hydrocarbons recently\nmeasured in the laboratory. The image shown is a complex refractive\nindex set for a 5W-20 motor oil taken across the mid-infrared.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-053/",
      "doi": "10.1002/essoar.10500283.1",
      "url": "https://doi.org/10.1002/essoar.10500283.1",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-117",
          "name": "Richard F. Niedziela",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-054",
      "title": "A skin-interfaced microfluidic platform supports dynamic sweat biochemical analysis during human exercise",
      "year": 2024,
      "type": "journal_article",
      "abstract": "Blood lactate concentration is an established circulating biomarker for measuring muscle acidity and can be evaluated for monitoring endurance, training routines, or athletic performance. Sweat is an alternative biofluid that may serve similar purposes and offers the advantage of noninvasive collection and continuous monitoring. The relationship between blood lactate and dynamic sweat biochemistry for wearable engineering applications in physiological fitness remains poorly defined. Here, we developed a microfluidic wearable band with an integrated colorimetric timer and biochemical assays that temporally captures sweat and measures pH and lactate concentration. A colorimetric silver nanoplasmonic assay was used to measure the concentration of lactate, and dye-conjugated SiO\n 2 \n nanoparticle–agarose composite materials supported dynamic pH analysis. We evaluated these sweat biomarkers in relation to blood lactate in human participant studies during cycling exercise of varying intensity. Iontophoresis-generated sweat pH from regions of actively working muscles decreased with increasing heart rate during exercise and was negatively correlated with blood lactate concentration. In contrast, sweat pH from nonworking muscles did not correlate with blood lactate concentration. Changes in sweat pH and blood lactate were observed in participants who did not regularly exercise but not in individuals who regularly exercised, suggesting a relationship to physical fitness and supporting further development for noninvasive, biochemical fitness evaluations.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-054/",
      "doi": "10.1126/scitranslmed.ado5366",
      "url": "https://doi.org/10.1126/scitranslmed.ado5366",
      "text_status": "read",
      "people": [],
      "places": [],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "nih",
          "label": "National Institutes of Health",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "originlab",
          "kind": "software"
        },
        {
          "name": "python",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "instrument_data",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-055",
      "title": "Direct measurements of multi-photon induced nonlinear lattice dynamics in semiconductors via time-resolved x-ray scattering",
      "year": 2016,
      "type": "journal_article",
      "abstract": "Abstract Nonlinear optical phenomena in semiconductors present several fundamental problems in modern optics that are of great importance for the development of optoelectronic devices. In particular, the details of photo-induced lattice dynamics at early time-scales prior to carrier recombination remain poorly understood. We demonstrate the first integrated measurements of both optical and structural, material-dependent quantities while also inferring the bulk impulsive strain profile by using high spatial-resolution time-resolved x-ray scattering (TRXS) on bulk crystalline gallium arsenide. Our findings reveal distinctive laser-fluence dependent crystal lattice responses, which are not described by previous TRXS experiments or models. The initial linear expansion of the crystal upon laser excitation stagnates at a laser fluence corresponding to the saturation of the free carrier density before resuming expansion in a third regime at higher fluences where two-photon absorption becomes dominant. Our interpretations of the lattice dynamics as nonlinear optical effects are confirmed by numerical simulations and by additional measurements in an n-type semiconductor that allows higher-order nonlinear optical processes to be directly observed as modulations of x-ray diffraction lineshapes.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-055/",
      "doi": "10.1038/srep39506",
      "url": "https://doi.org/10.1038/srep39506",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        }
      ],
      "funding": [
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        },
        {
          "funder_id": "depaul_urc",
          "label": "DePaul University Research Council",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-056",
      "title": "Ultrafast Carrier–Lattice Interactions and Interlayer Modulations of Bi<sub>2</sub>Se<sub>3</sub> by X-ray Free-Electron Laser Diffraction",
      "year": 2021,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-056/",
      "doi": "10.1021/acs.nanolett.1c01424",
      "url": "https://doi.org/10.1021/acs.nanolett.1c01424",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        },
        {
          "resource_id": "EXT-019",
          "name": "PAL-XFEL — Pohang Accelerator Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-019/"
        }
      ],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "gaussian",
          "kind": "software"
        },
        {
          "name": "vasp",
          "kind": "software"
        },
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-057",
      "title": "Non-thermal fluence threshold for femtosecond pulsed x-ray radiation damage in perovskite complex oxide epitaxial heterostructures",
      "year": 2019,
      "type": "journal_article",
      "abstract": "Intense hard x-ray pulses from a free-electron laser induce irreversible structural damage in a perovskite oxide epitaxial heterostructure when pulse fluences exceed a threshold value. The intensity of x-ray diffraction from a 25-nm thick epitaxial BiFeO3 layer on a SrTiO3 (STO) substrate measured using a series of pulses decreases abruptly with a per-pulse fluence of 2.7 × 106 photons μm−2 at a photon energy of 9.7 keV but remains constant for 1.3 × 106 photons μm−2 or less. The damage resulted in the destruction of the BiFeO3 thin film within the focal spot area and the formation of a deep cavity penetrating into the STO substrate via the removal of tens of nanometers of material per pulse. The damage threshold occurs at a fluence that is insufficient to heat the absorption volume to the melting point. The morphology of the ablated sample is consistent with fracture rather than melting. Together, these results indicate that the damage occurs via a nonthermal process consistent with ultrafast ionization of the absorption volume.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-057/",
      "doi": "10.1063/1.5128509",
      "url": "https://doi.org/10.1063/1.5128509",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-019",
          "name": "PAL-XFEL — Pohang Accelerator Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-019/"
        }
      ],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "gaussian",
          "kind": "software"
        },
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-058",
      "title": "Picosecond x-ray strain rosette reveals direct laser excitation of coherent transverse acoustic phonons",
      "year": 2016,
      "type": "journal_article",
      "abstract": "Abstract Using a strain-rosette, we demonstrate the existence of transverse strain using time-resolved x-ray diffraction from multiple Bragg reflections in laser-excited bulk gallium arsenide. We find that anisotropic strain is responsible for a considerable fraction of the total lattice motion at early times before thermal equilibrium is achieved. Our measurements are described by a new model where the Poisson ratio drives transverse motion, resulting in the creation of shear waves without the need for an indirect process such as mode conversion at an interface. Using the same excitation geometry with the narrow-gap semiconductor indium antimonide, we detected coherent transverse acoustic oscillations at frequencies of several GHz.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-058/",
      "doi": "10.1038/srep19140",
      "url": "https://doi.org/10.1038/srep19140",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        }
      ],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        },
        {
          "funder_id": "depaul_fsrg",
          "label": "DePaul Faculty Summer Research Grant (FSRG)",
          "scope": "internal"
        },
        {
          "funder_id": "depaul_usrp",
          "label": "CSH Undergraduate Research Program (USRP)",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-059",
      "title": "Subpicosecond Optical Stress Generation in Multiferroic BiFeO<sub>3</sub>",
      "year": 2022,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-059/",
      "doi": "10.1021/acs.nanolett.1c04831",
      "url": "https://doi.org/10.1021/acs.nanolett.1c04831",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-060",
      "title": "Ultrafast Optically Induced Perturbation of Oxygen Octahedral Rotations in Multiferroic BiFeO<sub>3</sub> Thin Films",
      "year": 2024,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-060/",
      "doi": "10.1021/acs.nanolett.4c01519",
      "url": "https://doi.org/10.1021/acs.nanolett.4c01519",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        }
      ],
      "methods": []
    },
    {
      "id": "PUB-061",
      "title": "Detecting cultural identity via robotic sensor data to understand differences during human-robot interaction",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-061/",
      "doi": "10.1080/01691864.2023.2277159",
      "url": "https://doi.org/10.1080/01691864.2023.2277159",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-011",
          "name": "Casey Bennett",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "python",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "version_control_or_repro",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-062",
      "title": "Sensing Companions",
      "year": 2018,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-062/",
      "doi": "10.1145/3173386.3177047",
      "url": "https://doi.org/10.1145/3173386.3177047",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-011",
          "name": "Casey Bennett",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-063",
      "title": "Resilient IoT Architectures Over Dynamic Sensor Networks With Adaptive Components",
      "year": 2017,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-063/",
      "doi": "10.1109/jiot.2016.2621998",
      "url": "https://doi.org/10.1109/jiot.2016.2621998",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-004",
          "name": "Sharief Oteafy",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-064",
      "title": "IoT in the Fog: A Roadmap for Data-Centric IoT Development",
      "year": 2018,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-064/",
      "doi": "10.1109/mcom.2018.1700299",
      "url": "https://doi.org/10.1109/mcom.2018.1700299",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-004",
          "name": "Sharief Oteafy",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-065",
      "title": "On the Benefits of Hysteresis in Tendon Driven Continuum Robots",
      "year": 2025,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-065/",
      "doi": "10.1109/icra55743.2025.11128117",
      "url": "https://doi.org/10.1109/icra55743.2025.11128117",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-010",
          "name": "David Hanley",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-066",
      "title": "Data-Driven Steering of Concentric Tube Robots in Unknown Environments via Dynamic Mode Decomposition",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-066/",
      "doi": "10.1109/lra.2022.3231490",
      "url": "https://doi.org/10.1109/lra.2022.3231490",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-010",
          "name": "David Hanley",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "mathematica",
          "kind": "software"
        },
        {
          "name": "github",
          "kind": "software"
        },
        {
          "name": "gaussian",
          "kind": "software"
        },
        {
          "name": "lab_or_local_compute",
          "kind": "practice"
        },
        {
          "name": "version_control_or_repro",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-067",
      "title": "Tumbling Locomotion of Tetrahedral Soft-Limbed Robots",
      "year": 2024,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-067/",
      "doi": "10.1109/lra.2024.3375627",
      "url": "https://doi.org/10.1109/lra.2024.3375627",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-014",
          "name": "Iyad Kanj",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-068",
      "title": "Soft Steps: Exploring Quadrupedal Locomotion With Modular Soft Robots",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-068/",
      "doi": "10.1109/access.2023.3289156",
      "url": "https://doi.org/10.1109/access.2023.3289156",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-014",
          "name": "Iyad Kanj",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-069",
      "title": "Hybrid Soft Robots Incorporating Soft and Stiff Elements",
      "year": 2022,
      "type": "journal_article",
      "abstract": "",
      "page_url": "",
      "doi": "10.1109/robosoft54090.2022.9762183",
      "url": "https://doi.org/10.1109/robosoft54090.2022.9762183",
      "text_status": "read",
      "people": [],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "matlab",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-070",
      "title": "Hybrid Game Control Envelope Synthesis",
      "year": 2026,
      "type": "journal_article",
      "abstract": "Control problems for embedded systems like cars and trains can be modeled by two-player hybrid games. Control envelopes, which are families of safe control solutions, correspond to nondeterministic policies that ensure a player following them will not lose. Each deterministic, finite specialization of the nondeterministic policy is a control solution. This paper synthesizes control envelopes for hybrid games that are as permissive as possible. It introduces subvalue maps, a compositional representation of such policies that enables verification and synthesis along the structure of the game. An inductive logical characterization in differential game logic (dGL) checks whether a subvalue map induces a sound control envelope which ensures that the player never loses, no matter what actions the opponent plays. The maximal subvalue map, which allows the most action options while still winning, is shown to exist and satisfy a logical characterization. An inductive subvalue map synthesis framework is obtained from the soundness characterization. An evaluation of the framework uses the significant expressivity of dGL to model and solve a broad range of control challenges.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-070/",
      "doi": "10.1145/3798230",
      "url": "https://doi.org/10.1145/3798230",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-005",
          "name": "Stefan Mitsch",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        }
      ],
      "methods": []
    },
    {
      "id": "PUB-071",
      "title": "Resonant x-ray absorption of strong-field-ionized CF\n                    <sub>3</sub>\n                    Br",
      "year": 2020,
      "type": "journal_article",
      "abstract": "Abstract \n \n We report on an experimental and theoretical study of strong-field laser ionization of CF\n 3 \n Br followed by resonant x-ray absorption at the Br\n K \n -edge. Distinct 1s → 4p, 5p Rydberg transitions of Br\n \n q \n +\n \n (\n q \n = 1–4) atomic ions are observed and identified with Hartree–Fock–Slater and relativistic configuration interaction calculations. Time-dependent density functional theory and\n ab initio \n molecular dynamics calculations were performed to simulate the dissociative ionization process and the molecular orbitals for the\n q \n = 1–4 charge states. Measurements were made with both parallel and perpendicular linear polarizations of the laser and x-rays, but dichroism was not observed, indicating negligible alignment by the laser ionization process. This result is explained by calculations on atomic Br and the molecular simulation.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-071/",
      "doi": "10.1088/1361-6455/abc49a",
      "url": "https://doi.org/10.1088/1361-6455/abc49a",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-072",
      "title": "Probing Electronic Strain Generation by Separated Electron-Hole Pairs Using Time-Resolved X-ray Scattering",
      "year": 2019,
      "type": "journal_article",
      "abstract": "Photogeneration of excess charge carriers in semiconductors produces electronic strain. Under transient conditions, electron-hole pairs may be separated across a potential barrier. Using time-resolved X-ray diffraction measurements across an intrinsic AlGaAs/n-doped GaAs interface, we find that the electronic strain is only produced by holes, and that electrons are not directly observable by strain measurements. The presence of photoinduced charge carriers in the n-doped GaAs is indirectly confirmed by delayed heat generation via recombination.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-072/",
      "doi": "10.3390/app9224788",
      "url": "https://doi.org/10.3390/app9224788",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-073",
      "title": "Enhancing Pulmonary Nodule Localization Based on Latent Representations",
      "year": 2025,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-073/",
      "doi": "10.1109/cbms65348.2025.00140",
      "url": "https://doi.org/10.1109/cbms65348.2025.00140",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-016",
          "name": "Thiru Ramaraj",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "gaussian",
          "kind": "software"
        }
      ]
    },
    {
      "id": "PUB-074",
      "title": "Application of Machine Learning Techniques to Drive Immunological Insights Towards Malaria Prognosis Using Microarray data",
      "year": 2024,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-074/",
      "doi": "10.1109/icmla61862.2024.00100",
      "url": "https://doi.org/10.1109/icmla61862.2024.00100",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-016",
          "name": "Thiru Ramaraj",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "instrument_data",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-075",
      "title": "Using Recommender Systems to Help Revitalize Local News",
      "year": 2022,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-075/",
      "doi": "10.1145/3511047.3536411",
      "url": "https://doi.org/10.1145/3511047.3536411",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-027",
          "name": "Bamshad Mobasher",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-076",
      "title": "PerSpect: Perspective-aware Contrastive Learning for Hybrid News Recommendation",
      "year": 2026,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-076/",
      "doi": "10.1145/3774935.3812713",
      "url": "https://doi.org/10.1145/3774935.3812713",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-027",
          "name": "Bamshad Mobasher",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-077",
      "title": "Developing a Long COVID Case Definition: Using Machine Learning to Distinguish Long COVID Based on Symptom Presentation",
      "year": 2025,
      "type": "journal_article",
      "abstract": "Efforts have been made to develop a case definition for Long COVID, with results differing on whether the case definition should be specific and exclusive, or broad and easily generalizable. Each of these methods has been subject to limitations. As most efforts have focused on symptoms, inclusion criteria have often relied on the binary occurrence of a symptom. The current study uses a more detailed measure that considers the frequency and severity of symptoms in a sample of individuals with Long COVID and matched controls who recovered from acute SARS-CoV-2 infection. Patients were diagnosed with Long COVID in a systematic process involving their completion of quantitative questionnaires, qualitative interviews, a physical examination, and general laboratory testing to rule out other diagnoses. Since samples were comparatively small given the number of symptoms investigated, Leave One Out Cross-Validation (LOOCV) was used to develop LASSO regression models to determine which symptoms best distinguished Long COVID from recovered controls. An ideal threshold for classifying Long COVID based on symptomatology was developed using a receiver operator characteristics (ROC) curve. The model presented in this article identified Long COVID with high accuracy. The importance of smell/taste was lessened in the current study, and gastrointestinal symptoms took on greater prominence in our study. It is possible to achieve high accuracy in differentiating those with Long COVID from those who have recovered. It is important to specify criteria of Long COVID and to measure symptoms comprehensively to identify those with Long COVID. Reliably identifying those who have developed Long COVID will help in the formulation of treatment strategies.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-077/",
      "doi": "10.3390/covid5120205",
      "url": "https://doi.org/10.3390/covid5120205",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-052",
          "name": "Jacob Furst",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-078",
      "title": "Tracking Together: A Robot-and-App-Based Speech Analysis System to Support Shared Meaning-Making Among Dementia Care Partners",
      "year": 2026,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-078/",
      "doi": "10.1145/3772318.3790450",
      "url": "https://doi.org/10.1145/3772318.3790450",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-011",
          "name": "Casey Bennett",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-079",
      "title": "A Novel Approach to Clustering Accelerometer Data for Application in Passive Predictions of Changes in Depression Severity",
      "year": 2023,
      "type": "journal_article",
      "abstract": "The treatment of mood disorders, which can become a lifelong process, varies widely in efficacy between individuals. Most options to monitor mood rely on subjective self-reports and clinical visits, which can be burdensome and may not portray an accurate representation of what the individual is experiencing. A passive method to monitor mood could be a useful tool for those with these disorders. Some previously proposed models utilized sensors from smartphones and wearables, such as the accelerometer. This study examined a novel approach of processing accelerometer data collected from smartphones only while participants of the open-science branch of the BiAffect study were typing. The data were modeled by von Mises-Fisher distributions and weighted networks to identify clusters relating to different typing positions unique for each participant. Longitudinal features were derived from the clustered data and used in machine learning models to predict clinically relevant changes in depression from clinical and typing measures. Model accuracy was approximately 95%, with 97% area under the ROC curve (AUC). The accelerometer features outperformed the vast majority of clinical and typing features, which suggested that this new approach to analyzing accelerometer data could contribute towards unobtrusive detection of changes in depression severity without the need for clinical input.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-079/",
      "doi": "10.3390/s23031585",
      "url": "https://doi.org/10.3390/s23031585",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-011",
          "name": "Casey Bennett",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-080",
      "title": "Integrative Sensing Techniques for Building Non-Invasive Body Sensor Networks",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-080/",
      "doi": "10.1109/icc45041.2023.10279753",
      "url": "https://doi.org/10.1109/icc45041.2023.10279753",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-004",
          "name": "Sharief Oteafy",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-081",
      "title": "Demo: Remote Heart Assessment using Deep Learning over IoT Phonocardiograms",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-081/",
      "doi": "10.1109/lcn58197.2023.10223343",
      "url": "https://doi.org/10.1109/lcn58197.2023.10223343",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-004",
          "name": "Sharief Oteafy",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-082",
      "title": "Synthesis and conformational analysis of\n                    <i>N</i>\n                    -BOC-protected-3,5-bis(arylidene)-4-piperidone EF-24 analogs as anti-cancer agents",
      "year": 2023,
      "type": "journal_article",
      "abstract": "Abstract \n \n Natural products and their analogs have been explored to stop the progression of cancer cells without unwanted side effects. Chalcones, compounds synthesized naturally in plants, have demonstrated potential as anti-cancer treatments. A library of bis-chalcones that are similar in structure to EF-24, a bis-chalcone molecule known to have anti-cancer properties, has been synthesized in order to examine their medicinal properties. This report highlights the synthesis of ten novel analogs, their anti-cancer activities, and conformational analysis via cryo-NMR and corroboration by density functional theory calculations of the lead compound\n 1b \n ,\n tert \n -butyl 3,5-bis((\n E \n )-4-methylbenzylidene)-4-oxopiperidine-1-carboxylate.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-082/",
      "doi": "10.1515/hc-2022-0162",
      "url": "https://doi.org/10.1515/hc-2022-0162",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-100",
          "name": "Kyle A. Grice",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-083",
      "title": "4-(Tris(4-methyl-1H-pyrazol-1-yl)methyl)aniline",
      "year": 2024,
      "type": "journal_article",
      "abstract": "4-(tris(4-methyl-1H-pyrazol-1-yl)methyl)aniline was prepared in a 63% yield utilizing a C–F activation strategy from a mixture of 4-(trifluoromethyl)aniline, 4-methylpyrazole, and KOH in dimethylsulfoxide (DMSO). The identity of the product was confirmed by nuclear magnetic resonance spectroscopy, infrared spectroscopy, mass spectrometry, and single-crystal analysis. An analysis of crystals grown from the layering method (CH2Cl2/acetone/pentane) indicated two distinct polymorphs of the title compound. Moreover, density functional theory calculations utilizing the MN15L density functional and the def2-TZVP basis set indicated that 4-(tris(4-methyl-1H-pyrazol-1-yl)methyl)aniline forms with similar energetics to the previously reported unmethylated analog.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-083/",
      "doi": "10.3390/m1823",
      "url": "https://doi.org/10.3390/m1823",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-100",
          "name": "Kyle A. Grice",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-084",
      "title": "Particulate Matter Production from Prescribed Burns in the Chicagoland Area",
      "year": 2024,
      "type": "journal_article",
      "abstract": "Prescribed burns are a land management tool currently used to aid in fire mitigation and to promote desired plant species and reduce undesired species, which are often invasive species. Currently, there is a public stigma surrounding the negative effects of prescribed burns, which impacts their use near residential areas. There are also particular challenges of conducting prescribed burns in urban and suburban areas. A better understanding of these relatively small-scale prescribed burns and their impact on atmospheric chemistry and air quality can allow for better communication with the public about their positive impacts, as well as for the acknowledgement and quantification of their drawbacks. This study considers the particulate matter concentrations proximate to prescribed fires being conducted in the greater Chicago metropolitan area. We deployed low-cost sensors in the spring and fall of 2022 at four sites. Concentrations of particulate matter exceeded accepted human health exposure limits at locations that burn crews would experience, but levels quickly returned to baseline after the high-intensity phase of the burn. With the ever-expanding wildland–urban interface and increased efforts in ecological restoration, understanding the particulate matter emissions of prescribed fires conducted near populated areas can provide more data regarding air quality impacts. These impacts should be weighed against the ecological benefits of prescribed burns and potential air quality impacts from uncontrolled burns from ecosystems that are not treated with prescribed burns. Measuring air quality impacts can also inform fire management practices with the goal of reducing future emissions. With the very present effects of climate change, understanding baselines regarding prescribed fires can better equip future research and fire professionals in fighting fire with fire.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-084/",
      "doi": "10.3390/fire7110379",
      "url": "https://doi.org/10.3390/fire7110379",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-097",
          "name": "Mark J. Potosnak",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-085",
      "title": "Impact of Drought on Isoprene Fluxes Assessed Using Field Data, Satellite-Based GLEAM Soil Moisture and HCHO Observations from OMI",
      "year": 2022,
      "type": "journal_article",
      "abstract": "Biogenic volatile organic compounds (BVOCs), primarily emitted by terrestrial vegetation, are highly reactive and have large effects on the oxidizing potential of the troposphere, air quality and climate. In terms of global emissions, isoprene is the most important BVOC. Droughts bring about changes in the surface emission of biogenic hydrocarbons mainly because plants suffer water stress. Past studies report that the current parameterization in the state-of-the-art Model of Emissions of Gases and Aerosols from Nature (MEGAN) v2.1, which is a function of the soil water content and the permanent wilting point, fails at representing the strong reduction in isoprene emissions observed in field measurements conducted during a severe drought. Since the current algorithm was originally developed based on potted plants, in this study, we update the parameterization in the light of recent ecosystem-scale measurements of isoprene conducted during natural droughts in the central U.S. at the Missouri Ozarks AmeriFlux (MOFLUX) site. The updated parameterization results in stronger reductions in isoprene emissions. Evaluation using satellite formaldehyde (HCHO), a proxy for BVOC emissions, and a chemical-transport model, shows that the adjusted parameterization provides a better agreement between the modelled and observed HCHO temporal variability at local and regional scales in 2011–2012, even if it worsens the model agreement in a global, long-term evaluation. We discuss the limitations of the current parameterization, a function of highly uncertain soil properties such as porosity.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-085/",
      "doi": "10.3390/rs14092021",
      "url": "https://doi.org/10.3390/rs14092021",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-097",
          "name": "Mark J. Potosnak",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nasa",
          "label": "NASA",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "instrument_data",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-086",
      "title": "Video Label Refinement for Temporal Localization",
      "year": 2025,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-086/",
      "doi": "10.1109/icme59968.2025.11209895",
      "url": "https://doi.org/10.1109/icme59968.2025.11209895",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-015",
          "name": "Daniela Raicu",
          "role": "coauthor"
        },
        {
          "person_id": "PER-016",
          "name": "Thiru Ramaraj",
          "role": "coauthor"
        },
        {
          "person_id": "PER-052",
          "name": "Jacob Furst",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-087",
      "title": "Autorevise",
      "year": 2022,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-087/",
      "doi": "10.1145/3477314.3507222",
      "url": "https://doi.org/10.1145/3477314.3507222",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-015",
          "name": "Daniela Raicu",
          "role": "coauthor"
        },
        {
          "person_id": "PER-052",
          "name": "Jacob Furst",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-088",
      "title": "Soft Robotic Snake Locomotion on Curved Surfaces",
      "year": 2026,
      "type": "journal_article",
      "abstract": "Snakes possess an extraordinary ability to traverse diverse terrains, thanks to their continuous bending and distributed surface contacts. While robotic snakes have replicated some of these locomotion capabilities, most existing designs rely on a rigid, articulated approach. However, the discrete nature of rigid-bodied construction poses challenges in maintaining a uniform distributed force, particularly when traversing curved surfaces. This article explores the locomotion potential of soft robotic snakes (SRSs) made primarily from soft, elastic materials, focusing on their ability to navigate curved surfaces. We introduce a novel locomotion gait specifically tailored for curved terrain, with parameterized movements to accommodate varying degrees of steepness. Recognizing the critical role of surface grip in locomotion on curved surfaces, we also present a mathematical model to adjust the gripping force exerted by distributed contacts, enhancing stability. Extensive experiments with our SRS prototype validate the effectiveness, viability, and robustness of the proposed locomotion strategies. Our findings pave the way for SRS applications in challenging environments such as cylindrical ducts, pipelines, and confined spaces, where traditional robotic systems may face limitations.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-088/",
      "doi": "10.1177/21695172251395478",
      "url": "https://doi.org/10.1177/21695172251395478",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-007",
          "name": "Muhammad Umer Huzaifa",
          "role": "coauthor"
        },
        {
          "person_id": "PER-014",
          "name": "Iyad Kanj",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-089",
      "title": "Cost-Effective Electronic Framework for Lower-limb Exoskeletons",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-089/",
      "doi": "10.1109/robio58561.2023.10354728",
      "url": "https://doi.org/10.1109/robio58561.2023.10354728",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-007",
          "name": "Muhammad Umer Huzaifa",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "CDM-006",
          "name": "Robotic Assisted Locomotion (RAL) Lab",
          "url": "https://depaul-resource-map.org/resources/CDM/CDM-006/"
        }
      ],
      "funding": [
        {
          "funder_id": "depaul_agif",
          "label": "Academic Growth and Innovation Fund",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "python",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
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      ]
    },
    {
      "id": "PUB-090",
      "title": "Scalable Alignment-Free Phylogenomics Using Normalized Compression Distance (NCD): A Case Study in Tomato (Solanum Lycopersicum) Whole Genomes",
      "year": 2025,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-090/",
      "doi": "10.1109/bibm66473.2025.11356483",
      "url": "https://doi.org/10.1109/bibm66473.2025.11356483",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-120",
          "name": "John Rogers",
          "role": "coauthor"
        },
        {
          "person_id": "PER-016",
          "name": "Thiru Ramaraj",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "depaul_urap",
          "label": "DePaul Undergraduate Research Assistantship Program (URAP)",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "gitlab",
          "kind": "software"
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        {
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        {
          "name": "version_control_or_repro",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-091",
      "title": "Evaluating Compression-Based Phylogeny Estimation in the Presence of Incomplete Lineage Sorting",
      "year": 2023,
      "type": "journal_article",
      "abstract": "This study assesses characteristics of the normalized compression distance (NCD) technique for building phylogenetic trees from molecular data. We examined results from a mammalian biological data set as well as a collection of simulated data with varying levels of incomplete lineage sorting. The implementation of NCD we analyze is a concatenation-based, distance-based, alignment-free, and model-free phylogeny estimation method, which takes concatenated unaligned sequence data as input and outputs a matrix of distances. We compare the NCD phylogeny estimation method with various other methods, including coalescent- and concatenation-based methods.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-091/",
      "doi": "10.1089/cmb.2022.0197",
      "url": "https://doi.org/10.1089/cmb.2022.0197",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-120",
          "name": "John Rogers",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-092",
      "title": "Game Design Games: Designing Games for Teaching Game Design",
      "year": 2025,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-092/",
      "doi": "10.1145/3723498.3723713",
      "url": "https://doi.org/10.1145/3723498.3723713",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-065",
          "name": "Richard Wetzel",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-093",
      "title": "Reproducible eScience: The Data Containerization Challenge",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-093/",
      "doi": "10.1109/e-science58273.2023.10254837",
      "url": "https://doi.org/10.1109/e-science58273.2023.10254837",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-124",
          "name": "Tanu Malik",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "github",
          "kind": "software"
        },
        {
          "name": "zenodo",
          "kind": "software"
        },
        {
          "name": "figshare",
          "kind": "software"
        },
        {
          "name": "gis",
          "kind": "practice"
        },
        {
          "name": "version_control_or_repro",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-094",
      "title": "Efficient Differencing of System-level Provenance Graphs",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-094/",
      "doi": "10.1145/3583780.3615171",
      "url": "https://doi.org/10.1145/3583780.3615171",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-124",
          "name": "Tanu Malik",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-095",
      "title": "Steam-Assisted Ammonolysis of MoO2 as a Synthetic Pathway to Oxygenated δ-MoN",
      "year": 2025,
      "type": "journal_article",
      "abstract": "A common route for the synthesis of molybdenum nitrides is through the temperature-programmed reaction of molybdenum oxides with NH3, or ammonolysis. In this work, the role of precursor phase, gas phase chemistry (impact of H2O), and temperature profile on the reaction outcome (700 °C) was examined, which resulted in varying amounts of MoO2, H2MoO5, and the nitride phases—cubic γ (nominally Mo2N) and hexagonal δ (nominally MoN). The phase fraction of the δ phase increased with precursor in the sequence MoO2 &gt; MoO3 &gt; H2MoO5. Steam in the reaction gas also favored the production of δ over γ, but with too much steam, MoO2 was obtained in the product. Synthesis conditions for obtaining nearly phase-pure δ were identified: MoO2 as the precursor, 2% H2O in the gas stream, and a moderate heating rate (3 °C/min). In situ X-ray diffraction provided insights into the reaction pathway. Extensive physico-chemical analysis of the δ phase, including synchrotron X-ray and neutron diffraction, electron microscopy, thermogravimetric analysis, X-ray photoelectron spectroscopy, and prompt gamma activation analysis, revealed its stoichiometry to be MoO0.108(8)N0.892(8)H0.012(5), indicating non-trivial oxygen incorporation. The presence of N/O ordering and an impurity phase Mo5N6 were also revealed, detectable only by neutron diffraction. Notably, a computationally predicted MoON phase (doi: 10.1103/PhysRevLett.123.236402), of interest due to its potential to display a metal-insulator transition, did not appear under any reaction condition examined.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-095/",
      "doi": "10.3390/ma18102340",
      "url": "https://doi.org/10.3390/ma18102340",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-103",
          "name": "Gabriela Gonzalez Aviles",
          "role": "coauthor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        },
        {
          "resource_id": "EXT-020",
          "name": "Spallation Neutron Source (SNS) — Oak Ridge National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-020/"
        }
      ],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-096",
      "title": "(Cu<sub><i>x</i></sub>Zn<sub>1–<i>x</i></sub>)<sub>0.456</sub>In<sub>1.084</sub>Ge<sub>0.46</sub>O<sub>3</sub> (0 ≤ <i>x</i> ≤ 1): A Complex, Ordered, Anion-Deficient Fluorite with Unusual Site-Specific Cation Mixing",
      "year": 2019,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-096/",
      "doi": "10.1021/acs.inorgchem.9b02692",
      "url": "https://doi.org/10.1021/acs.inorgchem.9b02692",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-103",
          "name": "Gabriela Gonzalez Aviles",
          "role": "coauthor"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-097",
      "title": "Effect of Zinc and Strontium Dopants on the Structure and Stability of Hydroxyapatite at High Temperatures",
      "year": 2018,
      "type": "thesis",
      "abstract": "Hydroxyapatite (HA) is a bioceramic that synthetically mimics human bone. High-temperature, in-situ X-ray diffraction data were measured on 10 at. % zinc-doped, 10 at. % strontium-doped, and undoped HA powders at the Advanced Photon Source at Argonne National Laboratory. The crystallographic structures and phase transitions were determined from Rietveld analysis, using programs such as GSAS-II, the FullProf Suite, and Matlab scripts.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-097/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/333",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "Dylan Correll Smith",
          "role": "author"
        },
        {
          "person_id": "PER-103",
          "name": "Gabriela Gonzalez Aviles",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        }
      ],
      "funding": [],
      "methods": [
        {
          "name": "fullprof",
          "kind": "software"
        },
        {
          "name": "gaussian",
          "kind": "software"
        },
        {
          "name": "gsas-ii",
          "kind": "software"
        },
        {
          "name": "matlab",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-098",
      "title": "The Crystal Structure of (CuxZn1-x)0.456In1.084Ge0.46O3 (CuZIGO) Using Neutron and X-ray Diffraction",
      "year": 2020,
      "type": "thesis",
      "abstract": "Diffraction data for synthesized CuZIGO samples were measured at APS, HFIR, and SNS. Rietveld analysis used GSAS-II and FullProf. Synthesis by the Poeppelmeier group at Northwestern.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-098/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/356",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "Boluwatife A. Adekoya",
          "role": "author"
        },
        {
          "person_id": "PER-103",
          "name": "Gabriela Gonzalez Aviles",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        },
        {
          "resource_id": "EXT-020",
          "name": "Spallation Neutron Source (SNS) — Oak Ridge National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-020/"
        }
      ],
      "funding": [],
      "methods": [
        {
          "name": "fullprof",
          "kind": "software"
        },
        {
          "name": "gsas-ii",
          "kind": "software"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-099",
      "title": "Crystallographic Analysis of the Dorsal Spine of Squalus suckleyi",
      "year": 2024,
      "type": "thesis",
      "abstract": "Wide-angle X-ray scattering / Rietveld study of spiny-dogfish dorsal spine bioapatite. Experimental set-up at APS sector 1, beamline 1-ID.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-099/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/608",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "John V. Karavitis",
          "role": "author"
        },
        {
          "person_id": "PER-103",
          "name": "Gabriela Gonzalez Aviles",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        }
      ],
      "funding": [
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        },
        {
          "funder_id": "depaul_internal",
          "label": "DePaul University (internal)",
          "scope": "internal"
        }
      ],
      "methods": [
        {
          "name": "fullprof",
          "kind": "software"
        },
        {
          "name": "gsas-ii",
          "kind": "software"
        },
        {
          "name": "matlab",
          "kind": "software"
        },
        {
          "name": "stats_gui",
          "kind": "practice"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-100",
      "title": "The Effect of Grain Size and Forming Gas Reduction on the Electrical Properties of Zinc Oxide",
      "year": 2013,
      "type": "thesis",
      "abstract": "Zinc oxide nanoparticle grain-growth and conductivity study. High-resolution XRD at APS; lab XRD at Northwestern Cohen/Scintag; Matlab and FullProf analysis.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-100/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/48",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "Rofeideh Mansourian",
          "role": "author"
        },
        {
          "person_id": "PER-103",
          "name": "Gabriela Gonzalez Aviles",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        },
        {
          "resource_id": "EXT-038",
          "name": "JB Cohen X-ray Diffraction Facility — Northwestern University",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-038/"
        }
      ],
      "funding": [],
      "methods": [
        {
          "name": "fullprof",
          "kind": "software"
        },
        {
          "name": "matlab",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-101",
      "title": "Analyzing Nanoscale Thermal Transport Using Time-Resolved X-ray Diffraction",
      "year": 2021,
      "type": "thesis",
      "abstract": "Time-resolved x-ray diffraction of laser-heated Cr/GaAs at APS beamline 7-ID. Data reduction in MATLAB TRXD; benchmarking against GID SL on the APS X-ray server.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-101/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/387",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "James Grammich",
          "role": "author"
        },
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        }
      ],
      "funding": [
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "mathematica",
          "kind": "software"
        },
        {
          "name": "instrument_data",
          "kind": "practice"
        },
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-102",
      "title": "Structural Studies of Proteins in Solution: Cytochrome-C and Mitochondrial RHO",
      "year": 2013,
      "type": "thesis",
      "abstract": "SAXS of cytochrome-c and mitochondrial-rho. X-rays generated at APS; BioCAT 18-ID-D hutch. 1D patterns reconstructed to 3D structures.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-102/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/47",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "Anthony Banks",
          "role": "author"
        },
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        }
      ],
      "funding": [],
      "methods": [
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-103",
      "title": "Time Resolved SAXS Analysis of Fusion Protein",
      "year": 2013,
      "type": "thesis",
      "abstract": "Temperature-jump SAXS of a viral fusion protein at APS Bio-CAT Sector 18. MATLAB codes in appendix.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-103/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/63",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "Matthew Andorf",
          "role": "author"
        },
        {
          "person_id": "PER-032",
          "name": "Eric Landahl",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        }
      ],
      "funding": [],
      "methods": [
        {
          "name": "national_user_facility",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-104",
      "title": "The Crystal Structure of Hexagonal Molybdenum Oxynitride Hydride",
      "year": 2023,
      "type": "thesis",
      "abstract": "Synchrotron XRD at APS 11-BM and neutron diffraction at SNS POWGEN; Rietveld analysis in GSAS-II. NIST PGAA on the same samples.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-104/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/561",
      "text_status": "read",
      "people": [
        {
          "person_id": "",
          "name": "Shriya Sinha",
          "role": "author"
        },
        {
          "person_id": "PER-103",
          "name": "Gabriela Gonzalez Aviles",
          "role": "thesis_advisor"
        }
      ],
      "places": [
        {
          "resource_id": "EXT-003",
          "name": "Advanced Photon Source (APS) — Argonne National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-003/"
        },
        {
          "resource_id": "EXT-020",
          "name": "Spallation Neutron Source (SNS) — Oak Ridge National Laboratory",
          "url": "https://depaul-resource-map.org/resources/EXT/EXT-020/"
        }
      ],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "doe",
          "label": "U.S. Department of Energy",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "gsas-ii",
          "kind": "software"
        }
      ]
    },
    {
      "id": "PUB-105",
      "title": "Multiwavelength X-Ray Diffraction",
      "year": 2015,
      "type": "thesis",
      "abstract": "Time-resolved XRD at APS Sector 7-ID. Analysis appendix in Matlab.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-105/",
      "doi": "",
      "url": "https://via.library.depaul.edu/csh_etd/133",
      "text_status": "read",
      "people": [
        {
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          "name": "Loay Ali Khalifa",
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      "url": "https://via.library.depaul.edu/csh_etd/343",
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          "name": "Steven Merriman",
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          "name": "Brianna Mabie",
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          "name": "Ines Kusmic",
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      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-060",
          "name": "Elizabeth Millan Brusslan",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-485",
      "title": "Equitable Law Enforcement and the Organized Crime Control Act of 1970 - United States v. Cappetto",
      "year": 2015,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-485/",
      "doi": "",
      "url": "https://openalex.org/W411182465",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-086",
          "name": "Haven Allen",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-486",
      "title": "Synthesis and styrene copolymerization of novel halogen, methyl, and phenoxy ring-disubstituted tert-butyl phenylcyanoacrylates",
      "year": 2022,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-486/",
      "doi": "10.26434/chemrxiv-2022-fjql2",
      "url": "https://doi.org/10.26434/chemrxiv-2022-fjql2",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-118",
          "name": "Lauren K. Miller",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-487",
      "title": "Gender, Body Image, and Depressive Symptoms among Low‐Income African American Adolescents",
      "year": 1999,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-487/",
      "doi": "10.1111/0022-4537.00117",
      "url": "https://doi.org/10.1111/0022-4537.00117",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-149",
          "name": "Kathryn Grant",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-488",
      "title": "Negative cognitive style and cortisol recovery accentuate the relationship between life stress and depressive symptoms",
      "year": 2017,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-488/",
      "doi": "10.1080/10253890.2017.1414800",
      "url": "https://doi.org/10.1080/10253890.2017.1414800",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-149",
          "name": "Kathryn Grant",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-489",
      "title": "From Drama to Science: Margaret Cavendish as Vanishing Mediator",
      "year": 2008,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-489/",
      "doi": "10.1111/j.1741-4113.2008.00526.x",
      "url": "https://doi.org/10.1111/j.1741-4113.2008.00526.x",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-152",
          "name": "John Shanahan",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-490",
      "title": "Tracking the Persistence of Harmonic Chains: Barcode and Stability",
      "year": 2025,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-490/",
      "doi": "10.4230/lipics.socg.2025.58",
      "url": "https://doi.org/10.4230/lipics.socg.2025.58",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-153",
          "name": "Salman Parsa",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-491",
      "title": "Profiles of a COVID-19 Syndemic: Anti-Asian Racism, Economic Challenges, and Mental and Physical Health",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-491/",
      "doi": "10.1007/s40615-023-01519-3",
      "url": "https://doi.org/10.1007/s40615-023-01519-3",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-156",
          "name": "Anne Saw",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-492",
      "title": "ACOUSTIC SIGNALS AND AGGRESSIVE CONFLICTS IN THE SKUNK LOACHBOTIA MORLETI:INTEGRATING SENSORY AND BEHAVIOURAL APPROACHES",
      "year": 2002,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-492/",
      "doi": "10.1080/09524622.2002.9753715",
      "url": "https://doi.org/10.1080/09524622.2002.9753715",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-046",
          "name": "Timothy Sparkes",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-493",
      "title": "Gene Expression Profiling Reveals Cyp26b1 to Be an Activin Regulated Gene Involved in Ovarian Granulosa Cell Proliferation",
      "year": 2010,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-493/",
      "doi": "10.1210/en.2010-0749",
      "url": "https://doi.org/10.1210/en.2010-0749",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-057",
          "name": "Jingjing Kipp",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nsf",
          "label": "National Science Foundation",
          "scope": "external"
        },
        {
          "funder_id": "depaul_fsrg",
          "label": "DePaul Faculty Summer Research Grant (FSRG)",
          "scope": "internal"
        },
        {
          "funder_id": "depaul_internal",
          "label": "DePaul University (internal)",
          "scope": "internal"
        }
      ],
      "methods": []
    },
    {
      "id": "PUB-494",
      "title": "Polyethylene microplastics affect osmoregulation, overall metabolism and induce anxiety in zebrafish",
      "year": 2026,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-494/",
      "doi": "10.1016/j.cbpc.2026.110659",
      "url": "https://doi.org/10.1016/j.cbpc.2026.110659",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-053",
          "name": "Jason Bystriansky",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-495",
      "title": "Fish Tissue Digestion and Microplastic Polymer Identification Protocol Using Open-Source FTIR Database",
      "year": 2026,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-495/",
      "doi": "",
      "url": "",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-053",
          "name": "Jason Bystriansky",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-496",
      "title": "The over-representation of indigenous people in Custody of Australia. by John Walker and David McDonald",
      "year": 1995,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-496/",
      "doi": "",
      "url": "https://openalex.org/W2529312781",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-169",
          "name": "John McDonald",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-497",
      "title": "Advancing environmental justice technologies & technospaces: A case study of ChiVes, open GIS, and participatory design",
      "year": 2026,
      "type": "journal_article",
      "abstract": "• Environmental Justice (EJ) technologies may be further fortified and refined when connected directly with the communities impacted by environmental injustices. • Grounding EJ technology work in explicit, equity-centered framings remains crucial to advance healthier communities by considering the content of data, how decisions were generated, as well as how resources will be distributed. • When viewed as a technospace, the process of developing and engaging with GIS technologies present new opp",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-497/",
      "doi": "10.1016/j.wss.2026.100360",
      "url": "https://doi.org/10.1016/j.wss.2026.100360",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-183",
          "name": "Michelle Stuhlmacher",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nasa",
          "label": "NASA",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "GIS",
          "kind": "software"
        },
        {
          "name": "github",
          "kind": "software"
        },
        {
          "name": "zenodo",
          "kind": "software"
        },
        {
          "name": "spreadsheet_or_office",
          "kind": "practice"
        },
        {
          "name": "version_control_or_repro",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-498",
      "title": "Fossil-based analyses of clades’ diversification patterns require taxonomic expertise and appropriate methodology",
      "year": 2026,
      "type": "journal_article",
      "abstract": "Summary Estimating deep-time diversification patterns and the establishment of extant biodiversity represent major challenges in macroevolution. Fossil record data provide essential information to address these topics, but their heterogeneous temporal and geographical distributions require using analytical approaches to process these data. Gardiner et al. 1 (hereafter GEA) used a deep-learning model 2 and a fossil-occurrences dataset 3 to estimate neoselachian richness over the last 145 myr. Res",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-498/",
      "doi": "10.64898/2026.02.27.708174",
      "url": "https://doi.org/10.64898/2026.02.27.708174",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-178",
          "name": "Kenshu Shimada",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-499",
      "title": "A Generalization of the Fractional Stockwell Transform",
      "year": 2025,
      "type": "journal_article",
      "abstract": "This paper presents a generalized fractional Stockwell transform (GFST), extending the classical Stockwell transform and fractional Stockwell transform, which are widely used tools in time–frequency analysis. The GFST on L2(R,C) is defined as a convolution consistent with the classical Stockwell transform, and the fundamental properties of GFST such as linearity, translation, scaling, etc., are discussed. We focus on establishing an orthogonality relation and derive an inversion formula as a dir",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-499/",
      "doi": "10.3390/fractalfract9030166",
      "url": "https://doi.org/10.3390/fractalfract9030166",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-184",
          "name": "Ahmed I. Zayed",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-500",
      "title": "Alkali Metal-Ion Binding by a Model Macrocycle Containing a C-I···N Halogen Bonded Network: A DFT Study of C-I···M+ and N···M+ Binding Interactions, M+ = Li+, Na+, K+, and Rb+",
      "year": 2024,
      "type": "journal_article",
      "abstract": "The complexation of an alkali metal ion by a model macrocycle is examined using the M05-2X/DGDZVP DFT method. The macrocycle is built by connecting three cyclopenta[b]pyrrole motifs with alternating acetylene and ethylene linkages. Replacing one of the C-H bonds in each motif with a C-I bond allows for the formation of three intramolecular C-I···N halogen bonds. Two distinct binding modes were found for the complexation of each metal ion. In one mode, the binding of the ion occurs solely by the",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-500/",
      "doi": "10.3390/inorganics12060161",
      "url": "https://doi.org/10.3390/inorganics12060161",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-172",
          "name": "Ruben D Parra",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "DFT",
          "kind": "method"
        },
        {
          "name": "gaussian",
          "kind": "software"
        },
        {
          "name": "AIMAll",
          "kind": "software"
        }
      ]
    },
    {
      "id": "PUB-501",
      "title": "Systematic review and meta-analysis of the effect of psychological interventions on anxiety in children and youth with chronic medical conditions",
      "year": 2024,
      "type": "journal_article",
      "abstract": "OBJECTIVES: Anxiety disorders affect 20%-50% of youth with chronic medical conditions (CMCs) and can interfere with medical care and treatment outcomes. Psychological therapies are typically designed for youth without CMCs; thus, this systematic review (Open Science Framework preregistration osf.io/a52nd/) assesses the effect of psychological therapies on anxiety, functional impairment and health-related quality of life (HRQOL) in this unique population. METHODS: We included randomized controlle",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-501/",
      "doi": "10.1093/jpepsy/jsae097",
      "url": "https://doi.org/10.1093/jpepsy/jsae097",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-174",
          "name": "Susan Tran",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nih",
          "label": "National Institutes of Health",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "osf",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "version_control_or_repro",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-502",
      "title": "A Model Halogen-Bonded Network as a Potential Tube-like Host for Li+: A DFT Study",
      "year": 2023,
      "type": "journal_article",
      "abstract": "The formation of a halogen-bonded network using four NHX-(CH2)3-NX-(CH2)3-NHX molecules (X = Cl, Br, or I) is investigated using DFT. The self-assembly of the four basic motifs results in a tube-like structure with C4h symmetry, with one halogen-bonded network located at each end of the structure and one at its center. Each halogen-bonded network has four quasi-planar N-X···N interactions with binding energies that increase with the size of X. The structure is found to bind Li+ at each of the ha",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-502/",
      "doi": "10.3390/inorganics12010016",
      "url": "https://doi.org/10.3390/inorganics12010016",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-172",
          "name": "Ruben D Parra",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-503",
      "title": "Bracelet-like Complexes of Lithium Fluoride with Aromatic Tetraamides, and Their Potential for LiF-Mediated Self-Assembly: A DFT Study",
      "year": 2023,
      "type": "journal_article",
      "abstract": "Geometries and binding energies of complexes between a LiF molecule and a model aromatic tetraamide are obtained using various DFT methods. The tetraamide consists of a benzene ring and four amides positioned so that the LiF molecule can bind via Li⋯O=C or N-H⋯F interactions. The complex with both interactions is the most stable one, followed by the complex with only N-H⋯F interactions. Doubling the size of the former resulted in a complex with a LiF dimer sandwiched between the model tetraamide",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-503/",
      "doi": "10.3390/molecules28124812",
      "url": "https://doi.org/10.3390/molecules28124812",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-172",
          "name": "Ruben D Parra",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "DFT",
          "kind": "method"
        }
      ]
    },
    {
      "id": "PUB-504",
      "title": "Health Literacy is a Predictor of Back Pain Sentiment in Social Media Posts (Preprint)",
      "year": 2025,
      "type": "journal_article",
      "abstract": "BACKGROUND Low back pain (LBP) is a complicated biopsychosocial disease, and individuals use varying coping strategies in response to their unique personal experience with LBP. Given the strong relationship between education and pain, health literacy (HL) plays a role in pain coping. OBJECTIVE In this study, we evaluated posts on the Reddit r/backpain forum, using natural language processing (NLP) to determine how HL was related to sentiment and emotional expression. METHODS We analyzed 6,918 po",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-504/",
      "doi": "10.2196/preprints.82372",
      "url": "https://doi.org/10.2196/preprints.82372",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-174",
          "name": "Susan Tran",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [
        {
          "funder_id": "nih",
          "label": "National Institutes of Health",
          "scope": "external"
        }
      ],
      "methods": [
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "ai_or_llm_assist",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-505",
      "title": "Special affine Fourier transform on generalized functions",
      "year": 2025,
      "type": "journal_article",
      "abstract": "We investigate the special affine Fourier transform on the space of rapidly decreasing functions S(R) and the space of tempered distributions S′(R), showing that it acts as a continuous bijection. Following this, we examine the extension of the special affine Fourier transform to a class of Boehmians that encompasses the space of tempered distributions.",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-505/",
      "doi": "10.1080/10652469.2025.2585492",
      "url": "https://doi.org/10.1080/10652469.2025.2585492",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-184",
          "name": "Ahmed I. Zayed",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-506",
      "title": "A novel special affine convolution and short time special affine Fourier transform",
      "year": 2025,
      "type": "journal_article",
      "abstract": "This article introduces a novel convolution for the special affine Fourier transform (SAFT) and establishes its convolution theorem and the product theorem. As its applications, we present the Plancherel theory and a rigorous proof of the inversion formulas for the special affine Fourier transform on L1(R) and L2(R). Additionally, this paper presents a hybrid integral transform called a short time special affine Fourier transform (STSAFT) which is defined in terms of the novel convolution. We es",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-506/",
      "doi": "10.1080/10652469.2025.2502988",
      "url": "https://doi.org/10.1080/10652469.2025.2502988",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-184",
          "name": "Ahmed I. Zayed",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-507",
      "title": "Earth observation",
      "year": 2024,
      "type": "journal_article",
      "abstract": "Earth observation (EO) - the gathering of information about the planet via in situ and remote sensing technologies - has allowed us to look at the Earth in new ways. The view from above provided by aerial and satellite imagery has been an essential source of spatial information in areas where we have very little data, such as out in the ocean or remote reaches of the rainforest. With the advent of big data, however, there has been a shift toward utilizing EO technologies in areas where data is a",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-507/",
      "doi": "10.4337/9781802203233.00017",
      "url": "https://doi.org/10.4337/9781802203233.00017",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-183",
          "name": "Michelle Stuhlmacher",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-508",
      "title": "Exposure to COVID-19, related stressors, and their emotional impact: associations with dimensions of coping among a diverse sample of adults",
      "year": 2024,
      "type": "journal_article",
      "abstract": "Objective The COVID-19 pandemic caused widespread distress and disruptions in access to mental healthcare. Coping behaviors influence mental well-being, but there is a gap in our understanding of what factors were associated with coping behaviors during the pandemic. We aimed to (1) identify coping styles of a diverse sample of adults during the COVID-19 pandemic and (2) understand how pandemic emotional impact was associated with each coping style, and how socioeconomic factors and exposure to",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-508/",
      "doi": "10.1080/18387357.2024.2440435",
      "url": "https://doi.org/10.1080/18387357.2024.2440435",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-186",
          "name": "Joanna Buscemi",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-509",
      "title": "Salivary cortisol levels and appraisals of daily hassles across dimensions of the tripartite model of anxiety and depression in emerging adults.",
      "year": 2023,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-509/",
      "doi": "10.1016/j.biopsycho.2022.108469",
      "url": "https://doi.org/10.1016/j.biopsycho.2022.108469",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-174",
          "name": "Susan Tran",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "qualtrics",
          "kind": "software"
        },
        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "survey_or_edc",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-510",
      "title": "Applying the developmental model of use disorders to hedonic hunger: a narrative review",
      "year": 2022,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-510/",
      "doi": "10.1080/10550887.2021.1926881",
      "url": "https://doi.org/10.1080/10550887.2021.1926881",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-186",
          "name": "Joanna Buscemi",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-511",
      "title": "When Scientific Reassessment Fails Citizen Science. Comment on Soldo, A. When Citizen Science Becomes Speculation: Evaluating the Reliability of Lamnid Shark Identification from Photographic Records in the Mediterranean. J. Mar. Sci. Eng. 2026, 14, 173",
      "year": 2026,
      "type": "journal_article",
      "abstract": "), based primarily on selected dental characters. Given the critically endangered status of white sharks in the Mediterranean [3] and the limited number of confirmed observations [4,5], occurrences of the species in this region serve as valuable population data points [6,7] and merit careful examination. Species identifications and reinterpretations should therefore be well-supported, which includes verification of source materials and firsthand communication with citizen scientists, and make use of multiple diagnostic characters whenever possible. Here, we re-examined the specimen using all o",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-511/",
      "doi": "10.3390/jmse14131148",
      "url": "https://doi.org/10.3390/jmse14131148",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-178",
          "name": "Kenshu Shimada",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-512",
      "title": "Late Cretaceous Marine Vertebrates from the Upper Half of the Pfeifer Shale Member of the Greenhorn Limestone in Central Kansas, USA, and Comments on the Geologically Oldest Mosasaur Remains in Kansas",
      "year": 2026,
      "type": "journal_article",
      "abstract": "The Pfeifer Shale Member of the Greenhorn Limestone is an Upper Cretaceous rock unit broadly distributed throughout central Kansas, USA, that was formed in the Western Interior Seaway of North America. Here, we describe fossil marine vertebrates collected from the upper half (uppermost 3 m) of the Pfeifer Shale in Russell County, Kansas, based on surface-collected materials as well as bulk sampling from two separate horizons within the stratigraphic interval. This study recovered approximately 550 taxonomically identifiable vertebrate specimens, including remains of at least 12 chondrichthyans",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-512/",
      "doi": "10.1660/062.129.0105",
      "url": "https://doi.org/10.1660/062.129.0105",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-178",
          "name": "Kenshu Shimada",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-513",
      "title": "The musculature and skeleton of the pelvic fin of the crocodile shark, Pseudocarcharias kamoharai (Matsubara, 1936) (Elasmobranchii: Lamniformes): Morphology and sexual dimorphism",
      "year": 2026,
      "type": "journal_article",
      "abstract": "Pseudocarcharias kamoharai (Matsubara, 1936) (Elasmobranchii: Lamniformes) is a small, viviparous, pseudocarchariid shark distributed throughout tropical ocean waters worldwide. Although the appendicular skeleton of elasmobranchs has been explored in the literature, little is known about the clasper skeleton. Additionally, the appendicular musculature in general is not well studied in elasmobranchs, especially that of the pelvic fins and claspers. The same can be said about the siphon sac, a muscular bladder associated with the clasper and related to reproduction in male elasmobranchs. Here, w",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-513/",
      "doi": "10.1002/ar.70201",
      "url": "https://doi.org/10.1002/ar.70201",
      "text_status": "read",
      "people": [
        {
          "person_id": "PER-178",
          "name": "Kenshu Shimada",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "zenodo",
          "kind": "software"
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        {
          "name": "scientific_computing",
          "kind": "practice"
        },
        {
          "name": "version_control_or_repro",
          "kind": "practice"
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      ]
    },
    {
      "id": "PUB-514",
      "title": "Connecting park access and use data for equitable environmental planning",
      "year": 2025,
      "type": "journal_article",
      "abstract": "To ensure equity in the provisioning of urban green spaces, both how green spaces are distributed (i.e., access) as well as whether residents are utilizing them (i.e., use) needs to be considered simultaneously. Yet, few green space equity studies have considered both access and use together, and the fragmented literature provides only a partial view of each. This disconnection partly lies in challenges in integrating disparate “access” and “use” datasets. Using the Phoenix-Mesa urbanized area in Arizona as a case study, we present the conceptual and data challenges we have encountered when li",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-514/",
      "doi": "10.1177/23998083251366735",
      "url": "https://doi.org/10.1177/23998083251366735",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-183",
          "name": "Michelle Stuhlmacher",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-515",
      "title": "As cities grow larger, they may also become less green",
      "year": 2025,
      "type": "journal_article",
      "abstract": "There is growing empirical evidence that cities share similar statistical patterns in terms of their social and economic characteristics. Many facets of urban life – ranging from personal income, innovation, crime, amenities, and infrastructure – have been found to follow non-linear, power-law scaling relationships with city size. Using Landsat and other satellite-derived data, we test whether urban green space exhibits scaling relationships on a global selection of 150 cities at global and individual city scales. We find that urban green space follows a pervasive sublinear scaling relationshi",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-515/",
      "doi": "10.1080/1747423x.2025.2514877",
      "url": "https://doi.org/10.1080/1747423x.2025.2514877",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-183",
          "name": "Michelle Stuhlmacher",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-516",
      "title": "Correction to: Spatial Futures",
      "year": 2024,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-516/",
      "doi": "10.1007/978-981-99-9761-9_17",
      "url": "https://doi.org/10.1007/978-981-99-9761-9_17",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-195",
          "name": "Alex G. Papadopoulos",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-517",
      "title": "Race, identity, territory",
      "year": 2021,
      "type": "journal_article",
      "abstract": "All parties the Great Powers and the Ottoman successor states worked up historical, geographic, linguistic, and ethnographic analyses as means for arguing for their opposing positions. The Treaty envisioned a Greater Bulgaria, very much in Russia&s;s interest, which would incorporate vast swaths of Thracian and Macedonian territory, thus seemingly putting an end to Greece&s;s expansionist aspirations. The introductory section provides a thumbnail of Greek geography&s;s subdisciplinary structure: it included works in \"general\", historical, \"philological\" (substantially, cultural), military, eth",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-517/",
      "doi": "10.4324/9781351018708-3",
      "url": "https://doi.org/10.4324/9781351018708-3",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-195",
          "name": "Alex G. Papadopoulos",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-518",
      "title": "The Hellenization of Salonica",
      "year": 2021,
      "type": "journal_article",
      "abstract": "Although Thessaloniki&s;s conquest may be considered one of Greece&s;s most significant gains from the Balkan Wars, the image of the city did not correspond to the Hellenic Kingdom&s;s imaginary of it. Hellenization as strategy and practice redefined difference in cosmopolitan Salonica by reshaping its demography, urban space, and the profile of everyday life for its constituent communities. Greece&s;s victories in the Balkan Wars created new circumstances both for the Hellenic State as well as for Thessaloniki&s;s Jewish community. The Hellenization of the New Lands&s; economy, Thessaloniki&s",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-518/",
      "doi": "10.4324/9781351018708-4",
      "url": "https://doi.org/10.4324/9781351018708-4",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-195",
          "name": "Alex G. Papadopoulos",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-519",
      "title": "Pomaks, “our forgotten siblings”",
      "year": 2021,
      "type": "journal_article",
      "abstract": "Building on the study of Western Thrace&s;s Muslim minority, this chapter focuses on one of its constituent ethnic groups, the Bulgarian-speaking Muslim Pomaks. It posits how Greek minority policy, built on the Lausanne legal-administrative framework and Hellenic nationalist geopolitics, has shaped the spatial logics of Pomak life, identity, and territoriality: the group&s;s forced spatial sequestration at different times, its efforts to integrate village economies to regional, national, and international markets controlled by others, its inclusion in competing Greek and Turkish spaces of comm",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-519/",
      "doi": "10.4324/9781351018708-6",
      "url": "https://doi.org/10.4324/9781351018708-6",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-195",
          "name": "Alex G. Papadopoulos",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-520",
      "title": "Shared Spaces, Shared Suffering: Exploring the Effects of COVID-19 on Urban Animal Advocacy Organizations in Chicago and Kansas City, USA",
      "year": 2022,
      "type": "journal_article",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-520/",
      "doi": "10.1007/978-3-030-94350-9_124",
      "url": "https://doi.org/10.1007/978-3-030-94350-9_124",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-197",
          "name": "Connie Johnston",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-521",
      "title": "Gut check",
      "year": 2020,
      "type": "journal_article",
      "abstract": "This chapter reviews findings related to the environment, climate, and intestinal flora and discusses the idea of the unitary human subject. It examines several challenges to the concepts of “anthropo” and the human subject. The concept of the rational human subject, capable of culture and reason, is, importantly, oppositional to the biological animal or the “not human”. Amanda M. Nichols asserts that posthumanist thought can further the development of “ecocentric” ethical frameworks which recognize the value of the entire biophysical world. In more general terms, posthumanism sees the disrupt",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-521/",
      "doi": "10.4324/9780429356988-14",
      "url": "https://doi.org/10.4324/9780429356988-14",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-197",
          "name": "Connie Johnston",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-522",
      "title": "Humans and Animals",
      "year": 2017,
      "type": "journal_article",
      "abstract": "An engaging and at times sobering look at the coexistence of humans and animals in the 21st century and how their sometimes disparate needs affect environments, politics, economies, and culture worldwide. There is an urgent need to understand human-animal interactions and relations as we become increasingly aware of our devastating impact on the natural resources needed for the survival of all animal species. This timely reference explores such topics as climate change and biodiversity, the impact of animal domestication and industrial farming on local and global ecosystems, and the impact of",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-522/",
      "doi": "10.5040/9798400667565",
      "url": "https://doi.org/10.5040/9798400667565",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-197",
          "name": "Connie Johnston",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-523",
      "title": "Livelier livelihoods",
      "year": 2015,
      "type": "journal_article",
      "abstract": "This chapter considers both human and nonhuman animals require livelihoods and must work for them on the farm. It discusses slaughter in the context of livelier livelihoods. The chapter also explores whether livelier livelihoods can benefit the interconnected and interdependent lives and well-being of farmed animals, farmers, and social and ecological systems in farm communities – especially in a changing climate and liberalizing global economy. Permaculture is an integrated system of agro-ecological design based on enabling the wants and needs of nonhuman species in order to produce and procu",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-523/",
      "doi": "10.4324/9781315762760-10",
      "url": "https://doi.org/10.4324/9781315762760-10",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-197",
          "name": "Connie Johnston",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-524",
      "title": "Connecting Courses, Curriculum, and Community, in Chicago",
      "year": 2020,
      "type": "journal_article",
      "abstract": "I am deeply honored to receive the 2019 Barbara A. Holland Scholar-Administrator Award as I believe strongly in interconnecting the elements of an urban institution: students, faculty, and community members, and integrating these within the classroom, curriculum, disciplinary structures, and administrative best practices. What is more, I suggest that such an integrative approach should be fundamental to our scholarly practice, as teaching, research and community engagement inform and reinforce each other. Our institutions give us opportunities to draw upon considerable resources that can be us",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-524/",
      "doi": "10.18060/23923",
      "url": "https://doi.org/10.18060/23923",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-198",
          "name": "Euan Hague",
          "role": "author"
        }
      ],
      "places": [
        {
          "resource_id": "UNI-004",
          "name": "Steans Center for Community-Based Service Learning",
          "url": "https://depaul-resource-map.org/resources/UNI/UNI-004/"
        }
      ],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-525",
      "title": "Hortus in Urbe : Building a Sustainable Development Curriculum in Chicago",
      "year": 2020,
      "type": "journal_article",
      "abstract": "Abstract In this chapter the authors describe the development of an interdisciplinary graduate program focusing on sustainable urban development at Chicago’s DePaul University. Locating the curriculum both in the administrative institutional context and the historical geography of a racially and economically segregated urban area, the authors discuss the process of program formation and adjustment over its first five years of operation, 2013–2018. The chapter highlights some of the challenges encountered by program faculty, from internal curricular competition to external classification of the",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-525/",
      "doi": "10.1108/s2055-364120200000018024",
      "url": "https://doi.org/10.1108/s2055-364120200000018024",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-198",
          "name": "Euan Hague",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-526",
      "title": "Introduction to A Research Agenda for Gentrification",
      "year": 2023,
      "type": "journal_article",
      "abstract": "The volume argues that the future of gentrification research should be accomplishing the end of gentrification. Much of the historic debate in the gentrification literature has been focused on what causes gentrification, the extent to which gentrification leads to displacement, and whether or not particular developments and policies count as gentrification. This volume takes as its starting point that displacement is the central experience of gentrification, and therefore, that gentrification is something to contest. The chapters in this volume argue for a research agenda for gentrification th",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-526/",
      "doi": "10.4337/9781800883208.00007",
      "url": "https://doi.org/10.4337/9781800883208.00007",
      "text_status": "unread",
      "people": [
        {
          "person_id": "PER-201",
          "name": "Winifred S Curran",
          "role": "author"
        }
      ],
      "places": [],
      "funding": [],
      "methods": []
    },
    {
      "id": "PUB-527",
      "title": "Publication listed on faculty profile (10.1016/j.aggp.2024.100058)",
      "year": null,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-527/",
      "doi": "10.1016/j.aggp.2024.100058",
      "url": "https://doi.org/10.1016/j.aggp.2024.100058",
      "text_status": "unread",
      "people": [],
      "places": [],
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      "methods": []
    },
    {
      "id": "PUB-528",
      "title": "Publication listed on faculty profile (10.1093/cdn/nzab080)",
      "year": null,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-528/",
      "doi": "10.1093/cdn/nzab080",
      "url": "https://doi.org/10.1093/cdn/nzab080",
      "text_status": "unread",
      "people": [],
      "places": [],
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    },
    {
      "id": "PUB-529",
      "title": "Publication listed on faculty profile (10.1139/apnm-2018-0240)",
      "year": null,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-529/",
      "doi": "10.1139/apnm-2018-0240",
      "url": "https://doi.org/10.1139/apnm-2018-0240",
      "text_status": "unread",
      "people": [],
      "places": [],
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    },
    {
      "id": "PUB-530",
      "title": "Ensuring Safe Sleep in the Pediatric Intensive Care Unit: A Systematic Review of Informed Development of Clinical Guidelines for Implementation in Practice",
      "year": 2022,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-530/",
      "doi": "10.1016/j.pedhc.2022.10.004",
      "url": "https://doi.org/10.1016/j.pedhc.2022.10.004",
      "text_status": "read",
      "people": [],
      "places": [],
      "funding": [],
      "methods": [
        {
          "name": "qualtrics",
          "kind": "software"
        },
        {
          "name": "survey_or_edc",
          "kind": "practice"
        }
      ]
    },
    {
      "id": "PUB-531",
      "title": "Forging connections in the wilderness: a pilot study on Judaism and mental health in outdoor behavioural healthcare",
      "year": 2023,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-531/",
      "doi": "10.1080/13674676.2023.2290073",
      "url": "https://doi.org/10.1080/13674676.2023.2290073",
      "text_status": "unread",
      "people": [],
      "places": [],
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    },
    {
      "id": "PUB-532",
      "title": "Telephone Triage Simulation in an Asynchronous Advanced Practice Nursing Course",
      "year": 2023,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-532/",
      "doi": "10.1097/01.nep.0000000000001150",
      "url": "https://doi.org/10.1097/01.nep.0000000000001150",
      "text_status": "unread",
      "people": [],
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      "methods": []
    },
    {
      "id": "PUB-533",
      "title": "Publication listed on faculty profile (10.1080/10911359.2020.1799902)",
      "year": null,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-533/",
      "doi": "10.1080/10911359.2020.1799902",
      "url": "https://doi.org/10.1080/10911359.2020.1799902",
      "text_status": "unread",
      "people": [],
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    },
    {
      "id": "PUB-534",
      "title": "Youth Service Provision and Coordination among Members of a Regional Human Trafficking Task Force.",
      "year": 2022,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-534/",
      "doi": "10.1177/0886260520961868",
      "url": "https://doi.org/10.1177/0886260520961868",
      "text_status": "unread",
      "people": [],
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    },
    {
      "id": "PUB-535",
      "title": "Publication listed on faculty profile (10.1073/pnas.1219277110)",
      "year": null,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-535/",
      "doi": "10.1073/pnas.1219277110",
      "url": "https://doi.org/10.1073/pnas.1219277110",
      "text_status": "unread",
      "people": [],
      "places": [],
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    },
    {
      "id": "PUB-536",
      "title": "Publication listed on faculty profile (10.1186/s12870-014-0266-7)",
      "year": null,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-536/",
      "doi": "10.1186/s12870-014-0266-7",
      "url": "https://doi.org/10.1186/s12870-014-0266-7",
      "text_status": "unread",
      "people": [],
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    },
    {
      "id": "PUB-537",
      "title": "Publication listed on faculty profile (10.1021/acs.jpcb.2c00628)",
      "year": null,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-537/",
      "doi": "10.1021/acs.jpcb.2c00628",
      "url": "https://doi.org/10.1021/acs.jpcb.2c00628",
      "text_status": "unread",
      "people": [],
      "places": [],
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    },
    {
      "id": "PUB-538",
      "title": "Cucurbit[8]uril Binds Nonterminal Dipeptide Sites with High Affinity and Induces a Type II β-Turn.",
      "year": 2024,
      "type": "",
      "abstract": "",
      "page_url": "https://depaul-resource-map.org/resources/PUB/PUB-538/",
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